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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs72826031 chr2:107340401 C/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826037 chr2:107349981 A/C PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826043 chr2:107362017 C/T PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826044 chr2:107362506 C/T PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826046 chr2:107365449 T/C PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826048 chr2:107365923 C/T PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826054 chr2:107372680 A/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826064 chr2:107376453 A/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826067 chr2:107378298 A/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs72826074 chr2:107383712 T/G PRAMEF16 chr1:13495254-13498260:+ 0.67 9.56 4.72E-13 Box Plot
ACC rs72836157 chr2:119746165 C/T GAGE2D chrX:49207160-49214420:+ 0.66 8.84 6.21E-12 Box Plot
ACC rs72865743 chr2:154489422 C/T PRHOXNB chr13:28552243-28562774:- 0.58 7.83 2.33E-10 Box Plot
ACC rs72868664 chr2:162907004 T/C PRHOXNB chr13:28552243-28562774:- 0.67 8.81 6.9E-12 Box Plot
ACC rs72868667 chr2:162907825 T/C PRHOXNB chr13:28552243-28562774:- 0.67 8.81 6.9E-12 Box Plot
ACC rs72899995 chr2:67789793 A/C PRHOXNB chr13:28552243-28562774:- 0.59 8.31 4.11E-11 Box Plot